Nonprofit SECURE 2.0 Plan Audits

SECURE 2.0 Compliance Guide for Nonprofit 403(b) and 401(k) Retirement Plan Audits

Nonprofit organizations maintain SECURE 2.0 compliance in retirement plan audits by tracking part-time service hours, verifying timely participant contribution deposits, aligning operations with updated plan documents, and proving active fiduciary oversight. The SECURE 2.0 Act introduces complex operational updates for nonprofit 403(b) and 401(k) benefit plans. Compliance officers must adapt to these new federal mandates quickly.

SECURE 2.0 Compliance Guide for Nonprofit 403(b) and 401(k) Retirement Plan Audits

Key Takeaways

Understanding SECURE 2.0 requirements helps nonprofit leaders maintain retirement plan compliance and avoid severe regulatory penalties. The summary below outlines the essential operational adjustments required for 403(b) and 401(k) benefit plans.

  • Part-Time Eligibility Tracking: Non-profits must track service hours for part-time employees who complete 500 hours over two consecutive years to ensure proper plan entry.
  • Timely Contribution Remittances: Salary deferrals must be deposited into participant accounts immediately to satisfy Department of Labor standards and avoid prohibited transaction penalties.
  • Operational Alignment: Plan software, automatic enrollment features, and emergency distribution rules must strictly reflect current plan documents.
  • Proactive Fiduciary Oversight: Documented committee reviews and annual plan audits protect non-profit board members from civil liability and expensive regulatory enforcement.

 

Tracking Hours for Long-Term Part-Time Employees

Mandated inclusion rules for long-term part-time employees require diligent tracking of participant service hours. Under SECURE 2.0, staff working 500 hours annually over two consecutive years qualify for deferral eligibility. Payroll systems must maintain clear, verifiable hour logs for all part-time personnel. Skipping these checks risks severe non-compliance during annual plan audits.

Department of Labor Compliance and Remittances

Testing the timely remittance of participant contributions remains a critical focus area for Department of Labor compliance. The Department of Labor strictly enforces rapid segregation of salary deferrals from general assets. Nonprofits must deposit employee funds as soon as administratively feasible. Delays create prohibited transactions that trigger mandatory interest payments and regulatory penalties.

Aligning Operations with Updated Plan Terms

Plan sponsors must verify that automatic enrollment features and emergency distribution rules strictly mirror plan documents. SECURE 2.0 introduces mandatory auto-enrollment for new plans alongside simplified emergency withdrawal provisions. Software settings must reflect actual plan language without discrepancies. Independent auditors examine these operational settings to catch misalignments early.

“Proactive retirement plan audits resolve operational errors early, protecting non-profits from severe IRS penalties and preserving valuable donor trust.”

Fiduciary Oversight and Risk Mitigation

Evaluating fiduciary oversight ensures plan administrators fulfill their duties without exposing the organization to civil liability. Nonprofit boards must document regular investment committee meetings and fee benchmark reviews. Active management reduces operational errors while protecting board members from personal liability. Strong fiduciary practices demonstrate clear operational control to external authorities.

Benefits of Annual Plan Audits

Completing annual plan audits protects plan sponsors from severe IRS penalties and DOL enforcement actions. Proactive audit testing resolves operational errors through voluntary correction programs before government regulators intervene. Nonprofits preserve donor trust and valuable funding by prioritizing thorough retirement plan compliance checks.

Key Audit Focus Areas for Plan Sponsors

  • Verification of eligibility hours for all temporary and part-time workers.
  • Payroll records cross-referenced with bank deposit timestamps.
  • Formal plan amendments matching current SECURE 2.0 operational mandates.
  • Documented committee minutes detailing retirement plan fee reviews.
  • Accurate application of auto-enrollment percentage escalations.
  • Proper classification and handling of participant emergency distributions.

Strategic Guidance for Non-Profit Retirement Plan Compliance

Navigating SECURE 2.0 mandates requires continuous vigilance, accurate payroll tracking, and strong operational controls. Nonprofit leadership must actively monitor plan administration, track employee service hours, and execute timely contribution remittances to maintain compliance. Partnering with experienced employee benefit plan auditors ensures your organization identifies operational gaps early. By taking a proactive approach to retirement plan audits, nonprofits protect their financial assets, uphold fiduciary responsibilities, and safeguard donor trust while supporting their dedicated workforce.

Disclaimer: This article provides general information and should not be considered professional financial or tax advice. Please consult with a qualified CPA or financial advisor for guidance specific to your individual business needs.

 

Questions?

Jackie leverages her experience in audit, review, and compilation services across multiple industries to serve clients, including those requiring specialized employee benefit plan audits. She applies her audit skills to a variety of engagements, encompassing many of the firm’s client engagements since joining the firm in 2019, ensuring compliance and financial accuracy across diverse sectors, including employee benefit plans.


Jacquelyn Liesch, CPA

[email protected]


Get in Touch

We’d love to know more about your business and how we can help.